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SRX032981: Whole Exome sequencing for the 1000 Genomes Project
176 ILLUMINA (Illumina HiSeq 2000) runs: 161.3M spots, 23.2G bases, 13.2Gb downloads

Design: Whole Exome sequencing for the 1000 Genomes Project via in-solution hybrid selection
Submitted by: Broad Institute (BI)
Study: Exome sequencing of (ASW) African ancestry in South West US population
PRJNA59835 • SRP004055 • All experiments • All runs
Samples: pool of 22 samples • Homo sapiens
Library:
Name: Solexa-42316
Instrument: Illumina HiSeq 2000
Strategy: WXS
Source: GENOMIC
Selection: Hybrid Selection
Layout: PAIRED
Spot descriptor:
1  forward barcode77  reverse

Experiment attributes: (show all 6 attributes...) (hide...)
EXPECTED_BASECALL_TABLE: match_edge="full" max_mismatch="1" min_match="7" r (show full text...)(hide...)
match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_469" member_name="tagged_469_CGCCTTCC" CGCCTTCC match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_818" member_name="tagged_818_TATCCAGG" TATCCAGG match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_389" member_name="tagged_389_CCAGCACC" CCAGCACC match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_657" member_name="tagged_657_GCCTAGCC" GCCTAGCC match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_320" member_name="tagged_320_CAATAGTC" CAATAGTC match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_745" member_name="tagged_745_GTCATCTA" GTCATCTA match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_388" member_name="tagged_388_CCAGAGCT" CCAGAGCT match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_214" member_name="tagged_214_AGGATCTA" AGGATCTA match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_426" member_name="tagged_426_CCTATGCC" CCTATGCC match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_223" member_name="tagged_223_AGGTTATC" AGGTTATC match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_579" member_name="tagged_579_GACAGTAA" GACAGTAA match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_190" member_name="tagged_190_AGCAATTC" AGCAATTC match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_584" member_name="tagged_584_GACCTAAC" GACCTAAC match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_866" member_name="tagged_866_TCGCCTTG" TCGCCTTG match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_899" member_name="tagged_899_TGCAAGTA" TGCAAGTA match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_861" member_name="tagged_861_TCCTTGGT" TCCTTGGT match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_375" member_name="tagged_375_CATGCTTA" CATGCTTA match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_583" member_name="tagged_583_GACCGTTG" GACCGTTG match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_110" member_name="tagged_110_ACAGTTGA" ACAGTTGA match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_726" member_name="tagged_726_GGTCCAGA" GGTCCAGA match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_151" member_name="tagged_151_ACTAAGAC" ACTAAGAC match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_163" member_name="tagged_163_ACTGTATC" ACTGTATC match_edge="full" max_mismatch="1" min_match="7" read_group_tag="tagged_821" member_name="tagged_821_TATCTGCC" TATCTGCC
5 BI attributes: (show...)(hide...)
BI GSSR Sample IDs: 65604.0, 65605.0, 65606.0, 65607.0, 65608.0, 65609.0, 65610.0, 65611.0, 65620.0, 65621.0, 65622.0, 65623.0, 65624.0, 65625.0, 65626.0, 65627.0, 65628.0, 65629.0, 65630.0, 65631.0, 65632.0, 65633.0, 65634.0
BI GSSR Sample LSIDs: broadinstitute.org:bsp.prod.sample:1D9UT, broadinstitute.org:bsp.prod.sample:1D9UU, broadinstitute.org:bsp.prod.sample:1D9UV, broadinstitute.org:bsp.prod.sample:1D9UW, broadinstitute.org:bsp.prod.sample:1D9UX, broadinstitute.org:bsp.prod.sample:1D9UY, broadinstitute.org:bsp.prod.sample:1D9UZ, broadinstitute.org:bsp.prod.sample:1D9V1, broadinstitute.org:bsp.prod.sample:1D9VA, broadinstitute.org:bsp.prod.sample:1D9VB, broadinstitute.org:bsp.prod.sample:1D9VC, broadinstitute.org:bsp.prod.sample:1D9VD, broadinstitute.org:bsp.prod.sample:1D9VE, broadinstitute.org:bsp.prod.sample:1D9VF, broadinstitute.org:bsp.prod.sample:1D9VG, broadinstitute.org:bsp.prod.sample:1D9VH, broadinstitute.org:bsp.prod.sample:1D9VI, broadinstitute.org:bsp.prod.sample:1D9VJ, broadinstitute.org:bsp.prod.sample:1D9VK, broadinstitute.org:bsp.prod.sample:1D9VL, broadinstitute.org:bsp.prod.sample:1D9VM, broadinstitute.org:bsp.prod.sample:1D9VN, broadinstitute.org:bsp.prod.sample:1D9VO
BI Project Name: C454
BI Target Set: whole_exome_agilent_1.1_refseq_plus_3_boosters
BI Work Request ID: 23276
Runs: 176 runs, 161.3M spots, 23.2G bases, 13.2Gb
Run# of Spots# of BasesSizePublished
SRR076210949,946136.8M79.1Mb2010-12-09
SRR0762131,019,199146.8M84.4Mb2010-12-09
SRR076228969,677139.6M81.6Mb2010-12-09
SRR076234890,857128.3M73.2Mb2010-12-09
SRR076236998,745143.8M83.2Mb2010-12-09
SRR076243920,385132.5M77.9Mb2010-12-09
SRR076245895,821129M73.7Mb2010-12-09
SRR0762501,108,104159.6M91.8Mb2010-12-09
SRR076252875,048126M73.4Mb2010-12-09
SRR076257848,312122.2M70.6Mb2010-12-09
SRR076258950,038136.8M78.5Mb2010-12-09
SRR076263982,444141.5M83.4Mb2010-12-09
SRR076273878,465126.5M74.3Mb2010-12-09
SRR076275909,494131M75.1Mb2010-12-09
SRR076276864,027124.4M71.5Mb2010-12-09
There are 161 omitted runs. See all runs in Run Selector.

#Member# of Spots# of Bases
1SRS003668 : tagged_818_TATCCAGG7M1G
2SRS003669 : tagged_214_AGGATCTA8M1.2G
3SRS003671 : tagged_110_ACAGTTGA7M1G
4SRS003672 : tagged_388_CCAGAGCT7.5M1.1G
5SRS003674 : tagged_320_CAATAGTC7.5M1.1G
6SRS003676 : tagged_579_GACAGTAA6.1M880.7M
7SRS003677 : tagged_583_GACCGTTG6.7M959M
8SRS003678 : tagged_861_TCCTTGGT7M1G
9SRS003737 : tagged_821_TATCTGCC7.4M1.1G
10SRS003738 : tagged_223_AGGTTATC8.7M1.3G
11SRS003740 : tagged_163_ACTGTATC7.4M1.1G
12SRS003741 : tagged_426_CCTATGCC8.1M1.2G
13SRS003744 : tagged_745_GTCATCTA7.4M1.1G
14SRS003746 : tagged_584_GACCTAAC7.1M1G
15SRS003747 : tagged_866_TCGCCTTG6.8M978.8M
16SRS003748 : tagged_899_TGCAAGTA6.8M980.8M
17SRS003749 : tagged_190_AGCAATTC7.5M1.1G
18SRS003751 : tagged_151_ACTAAGAC7.9M1.1G
19SRS003752 : tagged_375_CATGCTTA7.1M1G
20SRS003755 : tagged_469_CGCCTTCC7.8M1.1G
21SRS003756 : tagged_726_GGTCCAGA6.9M991.2M
22SRS003757 : tagged_657_GCCTAGCC7.5M1.1G
23 : defaultn/an/a

ID:
39925

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